8sp3_AB : 3D-footprint complex

structure name	ASYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sp3_A interface=262,357,361, rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe > 8sp3_B interface=209, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHR/K

Estimated binding specificities ?

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# IC=2.098 IC/col=0.105 n_of_columns=20

specificity:

A |  24  24  24  24  24  74  16  24  24  24  24  24  24   9  16  19  24  24   4  24
C |  24  24  24  24  24   7  16  24  24  24  24  24  24  11  45  39  24  24  81  24
G |  24  24  24  24  24   7  48  24  24  24  24  24  24  67  16  19  24  24   4  24
T |  24  24  24  24  24   8  16  24  24  24  24  24  24   9  19  19  24  24   7  24

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updated Mon Dec 18 03:01:09 2023