8sp3_EF : 3D-footprint complex

structure name	ASYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sp3_E interface=262,357, rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrrrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe > 8sp3_F interface=72, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfskieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RH/R

Estimated binding specificities ?

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# IC=1.875 IC/col=0.094 n_of_columns=20

specificity:

A |  24  24  24  24  24  96  16  24  24  24  24  24  24  12  16  24  24  21  24  24
C |  24  24  24  24  24   0  16  24  24  24  24  24  24  12  45  24  24  23  24  24
G |  24  24  24  24  24   0  45  24  24  24  24  24  24  60  19  24  24  21  24  24
T |  24  24  24  24  24   0  19  24  24  24  24  24  24  12  16  24  24  31  24  24

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updated Mon Dec 18 03:01:21 2023