8spo_IL : 3D-footprint complex

structure name	TETRAMERIZED ACTIVATION OF MAPSPARTA BOUND WITH NAD+
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;Ribonuclease H-like;
reference complex	8ffi_E 8ffi_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8spo_I interface=214,309,313, rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqeiydsnwlsilsfpeelrvreltfpavryknylctfipteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe > 8spo_L interface=209,290, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHR/KY

Estimated binding specificities ?

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# IC=6.006 IC/col=0.429 n_of_columns=14

specificity:

A |  96   6  24  24  18  24  24  24   0   0   6  24  24   0
C |   0  18  24  24  18  24  24  24   0  96  60  24  24  96
G |   0  54  24  24  18  24  24  24  96   0  18  24  24   0
T |   0  18  24  24  42  24  24  24   0   0  12  24  24   0

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updated Thu Sep 12 08:35:01 2024