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structure nameZNFS 1-7 OF CCCTC-BINDING FACTOR (CTCF) K365T MUTANT COMPLEXED WITH 23MER
(Transcriptional repressor CTCF)
referenceHorton et al. 'Nucleic 51 8447 2023
sourceHomo sapiens
experimentX-ray (resolution=2.19, R-factor=0.221)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
reference complex5kkq_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNRLTSERYERDYKRQTRSDV

Estimated binding specificities ?

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# IC=19.485 IC/col=1.026 n_of_columns=19 specificity:   
A |   0  96  24  24  81   5   0   0   5   0   0   0   0   0   6   5   0   0   5
C |  96   0  24  24   5   5  96   0  79  96  96  96  96   0   0  81   0   0   5
G |   0   0  24  24   5  81   0  96   7   0   0   0   0   0  90   5   0  96  79
T |   0   0  24  24   5   5   0   0   5   0   0   0   0  96   0   5  96   0   7
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updated Fri Sep 13 13:34:08 2024