interface graph thumbnail
legend  pdf

structure nameESCHERICHIA COLI RNA POLYMERASE CLOSED COMPLEX INTERMEDIATE AT THE LAMBDA PR PROMOTER
experimentNMR
structural superfamilyInsert subdomain of RNA polymerase alpha subunit;C-terminal domain of RNA polymerase alpha subunit;RBP11-like subunits of RNA polymerase;
reference complex3iyd_A 6psq_M 7c97_K 8y6u_I
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTRERQ/

Estimated binding specificities ?

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# IC=5.010 IC/col=0.835 n_of_columns=6 specificity:   
A |   0   7   7  66  96   9
C |   0   7  81   7   0  73
G |  96   9   1   9   0   7
T |   0  73   7  14   0   7
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updated Sat Jun 27 20:31:16 2026