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3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.


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updated Fri Sep 13 14:17:19 2024
structure nameDNA LIGASE 1 WITH NICK DNA 3'RG:C
(DNA ligase 1)
referenceKanalElamparithi et al. J.Biol.Chem. 300 107216 2024
sourceHomo sapiens
experimentX-ray (resolution=2.79, R-factor=0.201)
structural superfamilyATP-dependent DNA ligase DNA-binding domain;DNA ligase/mRNA capping enzyme, catalytic domain;Nucleic acid-binding proteins;
sequence familyATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal re;
reference complex8vdn_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence