8vmt_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE I-PPOI-DNA COMPLEX:REACTION AT PH7.0 (K+ MES) WITH 500 UM MG2+ FOR 160S
reference	Chang et al. 'To ? ? ?
source	Physarum polycephalum
experiment	X-ray (resolution=1.48, R-factor=?)
structural superfamily	His-Me finger endonucleases;
reference complex	8vms_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8vmt_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 8vmt_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=21.065 IC/col=1.053 n_of_columns=20

specificity:

A |   0   0  69   0   0   0   0   5   3   0  96  74   0  40   0  96   0   1   0  75
C |   0   0   5  96   0  96  36  84   8   0   0   3   0   1   0   0   0  53  96   7
G |   0  96  17   0   0   0   0   7   7   0   0   9  96  55  96   0  96   8   0   7
T |  96   0   5   0  96   0  60   0  78  96   0  10   0   0   0   0   0  34   0   7

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updated Fri Aug 1 20:44:52 2025