8vmw_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE I-PPOI-DNA COMPLEX:GROUND STATE AT PH6.0 (K+ MES) WITH NA+
reference	Chang et al. 'To ? ? ?
source	Physarum polycephalum
experiment	X-ray (resolution=1.60, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8vmw_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 8vmw_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=19.008 IC/col=1.000 n_of_columns=19

specificity:

A |   1   0  24   0   0   0   1   1   3   0  96  68   3  27   0  96   0   6   0
C |   5   0  24  96   0  96  33  88  11   0   0   5   3   3   0   0   0  76  96
G |   1  96  24   0   0   0   8   5   1   0   0  16  82  60  96   0  96   3   0
T |  89   0  24   0  96   0  54   2  81  96   0   7   8   6   0   0   0  11   0

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updated Thu Sep 12 11:01:01 2024