8vn0_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE I-PPOI-DNA COMPLEX:REACTION AT PH6.0 (K+ MES) WITH 500 UM MG2+ FOR 80S
reference	Chang et al. 'To ? ? ?
source	Physarum polycephalum
experiment	X-ray (resolution=1.60, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8vn0_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 8vn0_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=21.401 IC/col=1.070 n_of_columns=20

specificity:

A |   0   0   9   0   0   0   7   7   5   0  96  80   0  27   0  96   0   9   0  80
C |   0   0   6  96   0  96  57  84   7   0   0   6   3   0   0   0   0  63  96   3
G |   0  96  78   0   0   0   0   5   3   0   0   7  93  69  96   0  96   5   0   3
T |  96   0   3   0  96   0  32   0  81  96   0   3   0   0   0   0   0  19   0  10

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updated Thu Sep 12 11:01:46 2024