8vn1_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE I-PPOI-DNA COMPLEX:REACTION AT PH6.0 (K+ MES) WITH 500 UM MG2+ FOR 160S
reference	Chang et al. 'To ? ? ?
source	Physarum polycephalum
experiment	X-ray (resolution=1.79, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8vn1_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 8vn1_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=21.197 IC/col=1.060 n_of_columns=20

specificity:

A |   0   0  19   0   0   0   1   5   4   0  96  71   0  51   0  96   0   1   0  85
C |   0   0   3  96   0  96  71  80   3   0   0   9   1   0   0   0   0  61  96   7
G |   0  96  69   0   0   0   1   5   5   0   0   7  92  44  96   0  96   7   0   1
T |  96   0   5   0  96   0  23   6  84  96   0   9   3   1   0   0   0  27   0   3

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updated Thu Sep 12 11:01:57 2024