8vn2_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE I-PPOI-DNA COMPLEX:REACTION AT PH6.0 (K+ MES) WITH 500 UM MG2+ FOR 320S
reference	Chang et al. 'To ? ? ?
source	Physarum polycephalum
experiment	X-ray (resolution=1.63, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8vn2_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 8vn2_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=21.486 IC/col=1.074 n_of_columns=20

specificity:

A |   5   0  15   0   0   0   1   1   5   0  96  75   0  30   0  96   0   1   0  96
C |   3   0   9  96   0  96  28  92   7   0   0   5   3   3   0   0   0  72  96   0
G |   3  96  69   0   0   0   0   3   5   0   0   7  86  63  96   0  96   3   0   0
T |  85   0   3   0  96   0  67   0  79  96   0   9   7   0   0   0   0  20   0   0

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updated Thu Sep 12 11:02:09 2024