8vna_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE I-PPOI-DNA COMPLEX:REACTION AT PH8.0 (TRIS) WITH 500 UM MG2+ FOR 160S
reference	Chang et al. 'To ? ? ?
source	Physarum polycephalum
experiment	X-ray (resolution=1.54, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8vna_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 8vna_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=22.924 IC/col=1.146 n_of_columns=20

specificity:

A |   4   6  68   0   0   0   0   0   4   4  96  96   0  96   0  96   0   9   0  96
C |   4   4   9  96   0  96   0  96   4   4   0   0   0   0   0   0   0  10  96   0
G |   6  82  10   0   0   0   0   0   6   4   0   0  96   0  96   0  96   4   0   0
T |  82   4   9   0  96   0  96   0  82  84   0   0   0   0   0   0   0  73   0   0

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updated Thu Sep 12 11:03:14 2024