8vng_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE I-PPOI-DNA COMPLEX:REACTION AT PH6.0 (K+ MES) WITH 500 UM MN2+ FOR 40S
reference	Chang et al. 'To ? ? ?
source	Physarum polycephalum
experiment	X-ray (resolution=1.60, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8vng_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 8vng_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=23.130 IC/col=1.157 n_of_columns=20

specificity:

A |   5   5  71   0   0   0   0   0   0   5  96  96   0  96   0  96   0  10   0  96
C |   5   6   5  96   0  96   0  96   0   5   0   0   0   0   0   0   0  10  96   0
G |   5  80  10   0   0   0   0   0   0   6   0   0  96   0  96   0  96  12   0   0
T |  81   5  10   0  96   0  96   0  96  80   0   0   0   0   0   0   0  64   0   0

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updated Thu Sep 12 11:03:49 2024