8vnq_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE H98A I-PPOI-DNA COMPLEX AT PH6.0 (K+ MES) WITH 1 MM MN2+ FOR 1800S
reference	Chang et al. 'To ? ? ?
source	Physarum polycephalum
experiment	X-ray (resolution=1.93, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8vnq_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasalchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 8vnq_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasalchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=19.245 IC/col=1.013 n_of_columns=19

specificity:

A |   0  40   0   0   0   1  24  14   0  96  71   0  92   0  96   0  24   0  91
C |   0   3  96  13  96   3  60   7   0   0  11   1   1   0   0   0  24  96   3
G |  96  48   0   1   0   3   9   3   0   0   5  92   3  96   0  96  24   0   1
T |   0   5   0  82   0  89   3  72  96   0   9   3   0   0   0   0  24   0   1

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updated Thu Sep 12 11:05:05 2024