8vnq_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE H98A I-PPOI-DNA COMPLEX AT PH6.0 (K+ MES) WITH 1 MM MN2+ FOR 1800S
reference	Chang et al. 'To ? ? ?
source	Physarum polycephalum
experiment	X-ray (resolution=1.93, R-factor=?)
structural superfamily	His-Me finger endonucleases;
reference complex	8vms_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8vnq_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasalchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 8vnq_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasalchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=18.985 IC/col=0.999 n_of_columns=19

specificity:

A |   1   0  24   0   0   0   1   1   5   0  96  78   6  89   0  78   0   3   0
C |   1   0  24  96   0  96   4  88   5   2   0   7  15   1   0   0   0  47  96
G |   6  96  24   0   0   0   3   5   9   0   0   1  66   3  96  18  96   7   0
T |  88   0  24   0  96   0  88   2  77  94   0  10   9   3   0   0   0  39   0

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updated Mon Dec 16 13:48:58 2024