8vnu_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE H98A I-PPOI-DNA COMPLEX AT PH6.0 (K+ MES) WITH 70 MM TL+ FOR 1800S
reference	Chang et al. 'To ? ? ?
source	Physarum polycephalum
experiment	X-ray (resolution=2.20, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8vnu_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 8vnu_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=19.876 IC/col=1.046 n_of_columns=19

specificity:

A |   6   0  28   0   0   0   0   1  10   0  96  71   2  94   0  71   0   7   0
C |   1   0   5  96   0  96  13  92   7   0   0   9   7   1   0   0   0  36  96
G |   3  96  60   0   0   0   1   1   3   0   0   9  84   1  96  24  96   1   0
T |  86   0   3   0  96   0  82   2  76  96   0   7   3   0   0   1   0  52   0

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updated Thu Sep 12 11:05:32 2024