8vnu_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE H98A I-PPOI-DNA COMPLEX AT PH6.0 (K+ MES) WITH 70 MM TL+ FOR 1800S
reference	Chang et al. 'To ? ? ?
source	Physarum polycephalum
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	His-Me finger endonucleases;
reference complex	8vms_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8vnu_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 8vnu_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=20.046 IC/col=1.055 n_of_columns=19

specificity:

A |   0  19   0   0   0   0   7   6   0  96  78   0  71   0  96   0   7   0  84
C |   0   5  96  17  96   0  85   5   0   0   8   3   1   0   0   0  23  96   3
G |  96  65   0   0   0   0   3   7   0   0   5  92  24  96   0  96   7   0   3
T |   0   7   0  79   0  96   1  78  96   0   5   1   0   0   0   0  59   0   6

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updated Thu Jan 8 13:20:03 2026