8x51_AB : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF GABIJA GAJA IN COMPLEX WITH DNA(FOCUSED REFINEMENT)
experiment	NMR
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;
reference complex	8wy5_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8x51_A interface=301,304, mkfsnitiknfrnfekvninldnknvifgmndigktnflyalrflldkeirkfgfnksdyhkhdtskkieiiltldlsnyekdedtkklisvvkgartsanadvfyialeskyddkelygniilkwgseldnlidipgrgninaldnvfkviyinpkiviylieepeislhrsmqialskqlfeqstykyfflsthspellyemdntrlirvhstekvvcsshmynvnkalssalfaervlliegpsekilfekvldevepeyelnggfllevggtyfnhyvctlndlgithiiktdndlKskKgkkgvyellglnrclnllgrenldeitidipedikgkkkkerlnerkkeifkqyknevgeflgeriylseidlendlysaigesmkrifenedpvhylqksklfnmvelvnnlstkdcfdvfehekfaclkelvgs > 8x51_B interface=282,306,309, mkfsnitiknfrnfekvninldnknvifgmndigktnflyalrflldkeirkfgfnksdyhkhdtskkieiiltldlsnyekdedtkklisvvkgartsanadvfyialeskyddkelygniilkwgseldnlidipgrgninaldnvfkviyinpkiviylieepeislhrsmqialskqlfeqstykyfflsthspellyemdntrlirvhstekvvcsshmynvvkkklnkalssalfaervlliegpsekilfekvldevepeyelnggfllevggtYfnhyvctlndlgithiiktdndlKskKgkkgvyellglnrclnllgrenldeitidipedikgkkkkerlnerkkeifkqyknevgeflgeriylseidlendlysaigesmkrifenedpvhylqksklfnmvelvnnlstkdcfdvfehekfaclkelvgs
interface signature	KK/YKK

Estimated binding specificities ?

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# IC=4.302 IC/col=0.331 n_of_columns=13

specificity:

A |  76  12  24  84  24  24  24  24  24   8  32  24   4
C |  12   0  24   0  24  24  24  24  24   8   4  24   0
G |   0   0  24   4  24  24  24  24  24   8  36  24   4
T |   8  84  24   8  24  24  24  24  24  72  24  24  88

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updated Thu Jan 8 15:37:37 2026