interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameBACTERIAL HISTONE PROTEIN HBB FROM BDELLOVIBRIO BACTERIOVORUS BOUND TO DNA
(Transcription factor CBFNF-Yarchaeal histone domain-containing protein)
referenceHartmann et al. 'Nucleic ? ? 2024
sourceBdellovibrio bacteriovorus HD100
experimentX-ray (resolution=1.95, R-factor=0.223)
structural superfamilyHistone-fold;
multimeric complexes9ezz_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
  
  ------KG                                        +---7nkx_f    
                          +-----------------------2 
  LA--RG--                !                       +---7unc_a    
                          ! 
  ----RC--                !                         +--7xyf_B    
                          !           +-------------1 
  ----RT--              +-7       +---3             +--7kbd_C    
                        ! !       !   ! 
  IT------              ! !    +--4   +----------------3wkj_D    
                        ! !    !  ! 
  LT--RC--              ! !  +-5  +--------------------3kwq_E    
                      +-8 !  ! ! 
  LT--RC--            ! ! +--6 +-----------------------4xzq_E    
                      ! !    ! 
  QC--RG--          +-9 !    +------------------------7y7i_E    
                    ! ! ! 
  ----RG--          ! ! +-----------------------------6iy2_A    
                 +-10 ! 
  ----RT--       !  ! +-----------------------------7zs9_e    
               -11  !  
  --KT----   L   !  +-----------------------------7cvo_A    
                 !  
  ----RG--       +-----------------------------7ccr_A    
               

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updated Sat Sep 14 12:47:50 2024