1a6y_AB : 3D-footprint complex

structure name	REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX
reference	Khorasanizadeh et al. Mol.Cell 1 849 1998
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	1a6y_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1a6y_A interface=14,21,24,28,29,76, llckvcgdvasgfHygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgr > 1a6y_B interface=24,27,31,32,81, gmvllckvcgdvasgfhygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrfgRipk
interface signature	HEKRRF/EKRRR

Estimated binding specificities ?

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# IC=11.906 IC/col=0.850 n_of_columns=14

specificity:

A |  79   0   0   0   0  69  21  24  24   0   0   8   0  74
C |   0   0   0   0  96   8  52  24  24   0   0  13  96   4
G |  17  96  96   0   0  11  15  24  24  96  96  10   0  10
T |   0   0   0  96   0   8   8  24  24   0   0  65   0   8

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updated Sun Jan 4 20:38:45 2026