1a6y_AB : 3D-footprint complex

structure name	REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX
reference	Khorasanizadeh et al. Mol.Cell 1 849 1998
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1a6y_A interface=14,21,24,28,29,76, llckvcgdvasgfHygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgr > 1a6y_B interface=24,27,31,32,81, gmvllckvcgdvasgfhygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrfgRipk
interface signature	HEKRRF/EKRRR

Estimated binding specificities ?

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# IC=11.742 IC/col=0.839 n_of_columns=14

specificity:

A |  79   0   0   4   0  70  16  24  24   0   0   8   0  76
C |   0   0   0   5  96   8  66  24  24   0   0  10  96   4
G |  16  96  96   4   0   8   8  24  24  96  96   8   0   8
T |   1   0   0  83   0  10   6  24  24   0   0  70   0   8

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updated Fri Dec 13 08:39:44 2024