1a6y_AB : 3D-footprint complex

structure name	REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX
reference	Khorasanizadeh et al. Mol.Cell 1 849 1998
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	1a6y_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1a6y_A interface=14,21,24,28,29,76, llckvcgdvasgfHygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgr > 1a6y_B interface=24,27,31,32,81, gmvllckvcgdvasgfhygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrfgRipk
interface signature	HEKRRF/EKRRR

Estimated binding specificities ?

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# IC=11.243 IC/col=0.803 n_of_columns=14

specificity:

A |   6   0  57   0   0  24  24  24  14   0  96   0   0   0
C |  14   0  12  96  96  24  24  24   6   0   0  96  96  20
G |   6  90  15   0   0  24  24  24   0  96   0   0   0   6
T |  70   6  12   0   0  24  24  24  76   0   0   0   0  70

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updated Tue Jul 29 14:15:40 2025