| structure name | REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX (ORPHAN NUCLEAR RECEPTOR NR1D1) |
| reference | Khorasanizadeh et al. Mol.Cell 1 849 1998 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.30, R-factor=?) |
| structural superfamily | Glucocorticoid receptor-like DNA-binding domain; |
| sequence family | Zinc finger, C4 type two domains; |
| multimeric complexes | 1a6y_AB 1ga5_AB 1ga5_EF 1hlz_AB |
| redundant complexes | 1ga5_B
 1hlz_B
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | HEKRRF |
Estimated binding specificities ?
| readout + contact |  |
A | 0 43 0 0 13 C | 0 13 96 96 13 G | 96 27 0 0 16 T | 0 13 0 0 54scan! |
Dendrogram of similar interfaces ?
matrix formatECKG--RGRG--FT L +-----------------------------3dzy_D +-12 ECKA--RGRG---- L ! +-----------------------------4nqa_I ! DGKG--RTRG---- L ! +3cbb_A ! +----------1 ECKG--KGRG---- L ! ! +2ff0_A ! +-------8 ECKG--KGRG---- L -13 ! ! +1ynw_B ! ! ! +-2 EAKG--RTRTRT-- ! +-10 +--------5 +4umm_E ! ! ! ! ECKG--KGRG---- ! ! ! +-3dzy_A ! ! ! ECKG--RGRG---- L ! ! +------------------5uan_B ! ! EAKG--KTRG---- L +-------11 +2han_A ! +--3 ECKG--RGRG---- L ! +--------7 +2nll_B ! ! ! --KGVT--RG---- L ! ! +--5cbz_E +--------9 ETKGAT--RG---- L ! +1lat_A ! +-4 --KGVT--RG---- +---------6 +1r4i_A ! ECKG--KTRG---- L +-2nll_A |
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updated Fri Sep 13 15:22:35 2024