1am9_AB : 3D-footprint complex

structure name	HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER
reference	Burley et al. Structure 6 661 1998
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1am9_A interface=10,11,13,14,17,18, qsrgekrtaHNaIEkrYRssindkiielkdlvvgteaklnksavlrkaidyirflqhsnqklkqenlslrtavhkskslk > 1am9_B interface=6,9,10,12,13,16,17, srgekRtaHNaIEkrYRssindkiielkdlvvgteaklnksavlrkaidyirflqhsnqklkqenlslrtavhks
interface signature	HNIEYR/RHNIEYR

Estimated binding specificities ?

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# IC=7.064 IC/col=0.706 n_of_columns=10

specificity:

A |  30   2   0  61   4   8   3   2  61   4
C |  13   4  95  13  84  61  88  89  13  83
G |  38   2   0  12   3   7   3   2  12   5
T |  15  88   1  10   5  20   2   3  10   4

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updated Fri Dec 13 08:40:41 2024