1am9_CD : 3D-footprint complex

structure name	HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER
reference	Burley et al. Structure 6 661 1998
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	HLH, helix-loop-helix DNA-binding domain;
reference complex	1am9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1am9_C interface=10,11,13,14,17,18, qsrgekrtaHNaIEkrYRssindkiielkdlvvgteaklnksavlrkaidyirflqhsnqklkqenlslrtavhkskslkdl > 1am9_D interface=7,10,11,13,14,17,18, qsrgekRtaHNaIEkrYRssindkiielkdlvvgteaklnksavlrkaidyirflqhsnqklkqenlslrtavhks
interface signature	HNIEYR/RHNIEYR

Estimated binding specificities ?

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# IC=10.523 IC/col=1.052 n_of_columns=10

specificity:

A |  16   0   0  96   8   8   0   0  96   0
C |  16   0  96   0  64  72  96  96   0  96
G |  56   0   0   0   8   8   0   0   0   0
T |   8  96   0   0  16   8   0   0   0   0

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updated Tue Jul 29 14:16:24 2025