1au7_AB : 3D-footprint complex

structure name	PIT-1 MUTANT/DNA COMPLEX
reference	Leon-Del-Rio et al. 'Genes 11 198 1997
source	Rattus norvegicus
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;Homeodomain-like;
reference complex	1au7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1au7_A interface=39,40,41,44,45,51,55,75,116,117,120,121,124,125, gmraleqfanefkvrriklgytqtnvgealaavhgsefSQTtiCRfenlqLsfkNacklkailskwleeaeqkrRttisiaakdalerhfgehskpssqeimrmaeelnlekevvRVwfCNrrQRekrvk > 1au7_B interface=23,39,40,41,44,45,51,73,114,115,118,119,122, gmraleqfanefkvrriklgytQtnvgealaavhgsefSQTtiCRfenlqLsfknacklkailskwleeakrRttisiaakdalerhfgehskpssqeimrmaeelnlekevvRVwfCNrrQrekrvk
interface signature	SQTCRLNRRVCNQR/QSQTCRLRRVCNQ

Estimated binding specificities ?

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# IC=16.509 IC/col=1.179 n_of_columns=14

specificity:

A |  96   0   0   0  96   0  96   0  96   0  96   0  13  57
C |   0   0   0   0   0   0   0   0   0  96   0   0  13  13
G |   0   0  96   0   0   0   0   0   0   0   0   0  57  13
T |   0  96   0  96   0  96   0  96   0   0   0  96  13  13

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updated Mon Sep 9 11:55:00 2024