| structure name | PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX (PROTEIN PBX1) |
| reference | Batchelor et al. 'Cell(Cambridge,Mass.)' 96 587 1999 |
| source | HOMO SAPIENS |
| experiment | X-ray (resolution=2.35, R-factor=0.243) |
| structural superfamily | Homeodomain-like; |
| sequence family | Homeobox domain; |
| multimeric complexes | 1b72_AB |
| redundant complexes |  1lfu_P
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RNNIR |
Estimated binding specificities ?
| contact |  |
A | 54 0 0 96 13 C | 13 0 96 0 13 G | 16 0 0 0 16 T | 13 96 0 0 54scan! |
Dendrogram of similar interfaces ?
matrix formatRT--------------------NT--NAIARG-------- L +1b72_B +---3 RT--------------------NT--NAITRG-------- L +--------6 +5zjt_B ! ! RA--------------------ITQTNAMG---------- L +---8 +----5zjt_E ! ! ----------------------IA--NA------------ +--12 +-------------4qtr_D ! ! ----------------------NCITNA--------RGRG L ! ! +---6fqq_E ! +-------------5 ----------NT---------------------------- ! +---7tve_F ! RT--------------------NT--NA--RG-------- L ! +1b8i_B ! +-------4 RA------------------KGSAQA-------------- L ! ! +6j5b_C -14 +-----7 RT------------------KTIAQCNA----RT------ L ! ! ! +1ig7_A ! ! +--------2 RT--------------------ITQCNAACRG-------- L ! +-10 +6a8r_A ! ! ! RT--------------------IAKGNA------------ L ! ! ! +2hdd_A ! ! ! +--------------1 --------------YTVC--KGDCKC-------------- L ! +-11 +-9 +2qhb_A ! ! ! ! RA------YA------------IAQCNAYCKG-------- L ! ! ! +--------------5flv_I +-13 ! ----------------RTQT--ITQANA------VTKT-- L ! +----------------2ld5_A ! --NGRGTG----LG--LCRG-------------------- +------------------4e9f_A |
home
updated Thu Dec 22 17:21:58 2022