1b72_AB : 3D-footprint complex

structure name	PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX
reference	Batchelor et al. 'Cell(Cambridge,Mass.)' 96 587 1999
source	HOMO SAPIENS
experiment	X-ray (resolution=2.35, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1b72_A interface=11,53,56,57,60, artfdwmkvlRtnfttrqltelekefhfnkylsrarrveiaatlelnetqvkIwfQNrrMkqkkrere > 1b72_B interface=3,48,52,55,56, rkRrnfnkqateilneyfyshlsnpypseeakeelakkcgitvsqvsNwfgNkrIRykknigkfqeeaniyaa
interface signature	RIQNM/RNNIR

Estimated binding specificities ?

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# IC=9.780 IC/col=0.889 n_of_columns=11

specificity:

A |  76   0   0  96   5   5   6  96  81  24   6
C |   5   0   0   0   5   5   5   0   5  24  10
G |   5   0  96   0   0   6  80   0   5  24  75
T |  10  96   0   0  86  80   5   0   5  24   5

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updated Fri Dec 13 08:46:08 2024