interface graph thumbnail
legend  pdf

structure namePBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX
referenceBatchelor et al. 'Cell(Cambridge,Mass.)' 96 587 1999
sourceHOMO SAPIENS
experimentX-ray (resolution=2.35, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex1b72_A 1puf_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQNM/RNNIR

Estimated binding specificities ?

readout + contactlogo
# IC=8.745 IC/col=0.972 n_of_columns=9 specificity:   
A |   6   0   6  78  78   0   0  96   6
C |   6   0  78   6   6   0  96   0   6
G |   6   0   6   6   6   0   0   0   6
T |  78  96   6   6   6  96   0   0  78
scan!

home
updated Mon Sep 9 11:55:42 2024