interface graph thumbnail
legend  pdf

structure namePBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX
referenceBatchelor et al. 'Cell(Cambridge,Mass.)' 96 587 1999
sourceHOMO SAPIENS
experimentX-ray (resolution=2.35, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex1b72_A 1puf_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQNM/RNNIR

Estimated binding specificities ?

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# IC=8.810 IC/col=0.979 n_of_columns=9 specificity:   
A |  76   0   0  96   6   8   6  96  76
C |   8   0   0   0   6   6   6   0   6
G |   6   0  96   0   0   6  78   0   6
T |   6  96   0   0  84  76   6   0   8
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updated Tue Jul 29 14:22:15 2025