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structure nameCHROMOSOMAL DNA-BINDING PROTEIN SSO7D/D(GCGAACGC) COMPLEX
(PROTEIN CHROMOSOMAL PROTEIN SSO7D)
referencePadmanabhan et al. Nat.Struct.Biol. 5 782 1998
sourceSulfolobus acidocaldarius
experimentX-ray (resolution=1.60, R-factor=0.211)
structural superfamilyChromo domain-like;
sequence family7kD DNAbinding domain;
multimeric complexes1bbx_CD 6put_ACD 6puw_AC 6puy_ABC 6puz_ABC 6v3k_ABC 8w09_ACD 8w09_ILM 8w34_ACD 8w34_IM 9c9m_ACD 9c9m_IM
reference complex1bbx_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYKWVMSRA

Estimated binding specificities ?

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# IC=3.101 IC/col=0.620 n_of_columns=5 specificity:   
A |   0   0  13  24  13
C |  96   0  13  24  54
G |   0  96  16  24  13
T |   0   0  54  24  16
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updated Thu Jan 8 17:44:35 2026