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legend  pdf

structure nameCHROMOSOMAL DNA-BINDING PROTEIN SSO7D/D(GCGAACGC) COMPLEX
(PROTEIN CHROMOSOMAL PROTEIN SSO7D)
referencePadmanabhan et al. Nat.Struct.Biol. 5 782 1998
sourceSulfolobus acidocaldarius
experimentX-ray (resolution=1.60, R-factor=0.211)
structural superfamilyChromo domain-like;
sequence family7kD DNAbinding domain;
multimeric complexes1bbx_CD
reference complex1bbx_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYKWVMSRA

Estimated binding specificities ?

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# IC=3.101 IC/col=0.620 n_of_columns=5 specificity:   
A |   0   0  16  24  13
C |  96   0  13  24  54
G |   0  96  13  24  13
T |   0   0  54  24  16
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updated Mon Dec 18 04:58:09 2023