interface graph thumbnail
legend  pdf

structure nameMULTIPLE ANTIBIOTIC RESISTANCE PROTEIN (MARA)/DNA COMPLEX
(PROTEIN MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN)
referenceMartin et al. Proc.Natl.Acad.Sci.USA 95 10413 1998
sourceEscherichia coli
experimentX-ray (resolution=2.30, R-factor=0.225)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory helixturnhelix protei;
redundant complexes1xs9
reference complex1xs9_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSWHQRQQTR

Estimated binding specificities ?

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# IC=9.754 IC/col=0.650 n_of_columns=15 specificity:   
A |   0   0  24   0   0  75  24  24  24  24  13  13  20  13   0
C |   0   0  24   0  96   6  24  24  24  24   6   9   0   0  96
G |   0   0  24  96   0   6  24  24  24  24  54   6  75  83   0
T |  96  96  24   0   0   9  24  24  24  24  23  68   1   0   0
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Dendrogram of similar interfaces ?

matrix format



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updated Thu Sep 12 14:33:41 2024