1xs9_A : 3D-footprint complex

structure name	A MODEL OF THE TERNARY COMPLEX FORMED BETWEEN MARA, THE ALPHA-CTD OF RNA POLYMERASE AND DNA (MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN MARA)
source	ESCHERICHIA COLI
experiment	NMR
structural superfamily	Homeodomain-like;
sequence family	Bacterial regulatory helixturnhelix protei;
redundant complexes	1bl0_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1xs9_A interface=42,43,45,46,91,92,95,96, mtmsrrntdaitihsildwiednlesplslekvsersgyskWHlQRmfkketghslgqyirsrkmteiaqklkesnepilylaerygfesQQtlTRtfknyfdvpphkyrmtnmqgesrflhplnhyns
interface signature	WHQRQQTR

Estimated binding specificities ?

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# IC=9.166 IC/col=0.573 n_of_columns=16

specificity:

A |   0   8  24  24   0  96  24  24  24  24  24  19   8   0   0  61
C |   0   8  24  24  96   0  24  24  24  24  24   0   0   0  96  19
G |   0   8  24  24   0   0  24  24  24  24  24   8  87  96   0   8
T |  96  72  24  24   0   0  24  24  24  24  24  69   1   0   0   8

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updated Mon Jun 29 14:47:56 2026