1bp7_AB : 3D-footprint complex

structure name	GROUP I MOBILE INTRON ENDONUCLEASE I-CREI COMPLEXED WITH HOMING SITE DNA
reference	Monnat Junior et al. Mol.Cell 2 469 1998
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1bp7_A interface=21,23,25,27,29,31,32,37,43,45,65,67,69,72,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 1bp7_B interface=21,23,25,27,29,31,32,37,43,45,65,67,69,72,74,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsDyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld
interface signature	SIQKNSYQQTYRRVKT/SIQKNSYQQTYRRVDT

Estimated binding specificities ?

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# IC=24.604 IC/col=1.070 n_of_columns=23

specificity:

A |   6   0  96  96  78   0   0   0   0   0   6  24  24   6   0  96   0   0   0   6   0   0   0
C |  72   0   0   0   6  96   0   0   0  96   6  24  24  78   0   0  96   0   0   6   0   0   0
G |  12  96   0   0   6   0   0  96   0   0   6  24  24   6  96   0   0  96   0   6   0   0  96
T |   6   0   0   0   6   0  96   0  96   0  78  24  24   6   0   0   0   0  96  78  96  96   0

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updated Fri Dec 13 08:48:17 2024