1bp7_CD : 3D-footprint complex

structure name	GROUP I MOBILE INTRON ENDONUCLEASE I-CREI COMPLEXED WITH HOMING SITE DNA
reference	Monnat Junior et al. Mol.Cell 2 469 1998
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1bp7_C interface=21,23,25,27,29,31,32,37,43,45,65,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsDyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 1bp7_D interface=21,23,25,27,29,31,32,37,43,45,65,67,69,72,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQKNSYQQTYRRVDKT/SIQKNSYQQTYRRVKT

Estimated binding specificities ?

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# IC=24.199 IC/col=1.100 n_of_columns=22

specificity:

A |   0  96  96  70   0  17   0   0   0   8  83  24   4   0  96   0   0   0   8   0   0   0
C |   0   0   0   4  96   0   0   0  96   8   4  24  83   0   0  96   0   0  14   0   0   0
G |  96   0   0  12   0   0  96   0   0   4   5  24   4  96   0   0  96   0   4   0   0  96
T |   0   0   0  10   0  79   0  96   0  76   4  24   5   0   0   0   0  96  70  96  96   0

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updated Mon Sep 9 11:57:51 2024