1bp7_CD : 3D-footprint complex

structure name	GROUP I MOBILE INTRON ENDONUCLEASE I-CREI COMPLEXED WITH HOMING SITE DNA
reference	Monnat Junior et al. Mol.Cell 2 469 1998
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1bp7_C interface=21,23,25,27,29,31,32,37,43,45,65,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsDyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 1bp7_D interface=21,23,25,27,29,31,32,37,43,45,65,67,69,72,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQKNSYQQTYRRVDKT/SIQKNSYQQTYRRVKT

Estimated binding specificities ?

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# IC=24.028 IC/col=1.092 n_of_columns=22

specificity:

A |   0  96  96  70  96   0   0   0   0   4  24   5  76   0  96   0  75   0   8   0   0   0
C |  96   0   0   8   0  96   0   0  96   4  24   8   8   0   0  96   0   0   8   0   0  96
G |   0   0   0  10   0   0  96   0   0  83  24   4   4  96   0   0   0  96   8   0   0   0
T |   0   0   0   8   0   0   0  96   0   5  24  79   8   0   0   0  21   0  72  96  96   0

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updated Fri Dec 13 08:48:32 2024