1c0w_ABCD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE COBALT-ACTIVATED DIPHTHERIA TOXIN REPRESSOR- DNA COMPLEX REVEALS A METAL BINDING SH-LIKE DOMAIN
reference	Holmes et al. J.Mol.Biol. 292 653 1999
source	Corynebacterium diphtheriae
experiment	X-ray (resolution=3.20, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1c0w_A interface=36,38,39,42,46, kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvsQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeacrwehvmsdeverrlvkvlkdvsrspfgnpipgldelgvivqineifqvetdqftqlldavellddlahtiri > 1c0w_B interface=36,38,39,41,42, kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvSQtvarmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeacrwehvmsdeverrlvkvlkdvsrspfgnpipgldelgvapgtrvidaatsmprkvrivqineifqvetdqftqlldadirvgseveivdrdghitlshngkdvellddlahtirieel > 1c0w_C interface=36,38,39,42,46, kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvsQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeacrwehvmsdeverrlvkvlkdvsrspfgnpipgldelgvivqineifqvetdqftqlldadirvellddlahtir > 1c0w_D interface=36,38,39,41,42, kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvSQtvarmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeacrwehvmsdeverrlvkvlkdvsrspfgnpipgldelgvvqineifqvetdqftqlldadirvvellddlahtir
interface signature	SPTQR/SPTSQ/SPTQR/SPTSQ

Estimated binding specificities ?

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# IC=15.081 IC/col=1.005 n_of_columns=15

specificity:

A |  13  24  77   4   0   0  96   4   0   0   0  96   0   4   6
C |   4  24   9   4   0   0   0   4  96  96   0   0  96  82   4
G |   4  24   6  79  96   0   0  82   0   0   0   0   0   6   4
T |  75  24   4   9   0  96   0   6   0   0  96   0   0   4  82

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updated Fri Dec 13 08:49:39 2024