| structure name | DIPHTHERIA TOX REPRESSOR (C102D MUTANT)/TOX DNA OPERATOR COMPLEX (DIPHTHERIA TOX REPRESSOR) |
| reference | Vanderspek et al. |
| source | Corynebacterium diphtheriae |
| experiment | X-ray (resolution=3.00, R-factor=?) |
| structural superfamily | Iron-dependent repressor protein, dimerization domain;"Winged helix" DNA-binding domain; |
| sequence family | Iron dependent repressor, Nterminal D; Iron dependent repressor, metal bindin; MarR family; |
| multimeric complexes | 1c0w_ABCD 1ddn_ABCD |
| redundant complexes |  1c0w_D
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | SPTSQR |
Estimated binding specificities ?
readout + contact |  |
A | 73 0 7 0 73 73 C | 7 96 73 0 7 7 G | 7 0 7 0 7 9 T | 9 0 9 96 9 7scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: TOX REPRESSOR | ||
| ACAATTAGG | PubMed | 1ddn_B(3.90e-05), 1c0w_D(3.90e-06) |
| ATAATTAGG | PubMed | 1ddn_B(3.90e-05), 1c0w_D(3.90e-06) |
Dendrogram of similar interfaces ?
matrix format----RGSTRTSTHG------------ L +-----------------------------3zpl_B +-1 --SG--PTPGTT--------HG---- L +-2 +-----------------------------7d98_Q ! ! TT----KATTQTTGLTRTKA--FTYT L +-3 +-----------------------------2p7c_B ! ! --------------YG---------- --4 +-----------------------------3eyi_B ! --DCLT--AGTTRG--RG-------- L +-----------------------------5h3r_A |
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updated Sun Aug 3 05:26:42 2025