interface graph thumbnail
legend  pdf

structure nameDIPHTHERIA TOX REPRESSOR (C102D MUTANT)/TOX DNA OPERATOR COMPLEX
referenceVanderspek et al.
sourceCorynebacterium diphtheriae
experimentX-ray (resolution=3.00, R-factor=?)
structural superfamilyIron-dependent repressor protein, dimerization domain;"Winged helix" DNA-binding domain;
reference complex1ddn_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSPTQRR/SPTSQR/SPTQR/SPTSQR

Estimated binding specificities ?

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# IC=14.633 IC/col=0.976 n_of_columns=15 specificity:   
A |  88  10   0  93  11  96   0   0   0   0  24  80   0   7   3
C |   0  11   0   0  11   0   0  96   0   0  24   3  96  71   3
G |   3  72  96   3   9   0  96   0   0   0  24   7   0  11   6
T |   5   3   0   0  65   0   0   0  96  96  24   6   0   7  84
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updated Mon Sep 9 12:04:18 2024