interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPSB
(MULTIDRUG-EFFLUX TRANSPORTER REGULATOR)
referenceZheleznova-Heldwein et al. Nature 409 378 2001
sourceBacillus subtilis
experimentX-ray (resolution=3.12, R-factor=?)
structural superfamilyProbable bacterial effector-binding domain;Putative DNA-binding domain;
sequence familyMerR family regulatory protein;
multimeric complexes7ckq_CDFGI
reference complex7ckq_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRY

Estimated binding specificities ?

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# IC=2.635 IC/col=0.659 n_of_columns=4 specificity:   
A |  11  11   9   0
C |  67  67  67   0
G |   9   9   9   0
T |   9   9  11  96
scan!

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updated Mon Dec 16 17:47:31 2024