interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPP
(MULTIDRUG-EFFLUX TRANSPORTER REGULATOR)
referenceZheleznova-Heldwein et al. Nature 409 378 2001
sourceBacillus subtilis
experimentX-ray (resolution=3.00, R-factor=?)
structural superfamilyProbable bacterial effector-binding domain;Putative DNA-binding domain;
sequence familyMerR family regulatory protein;
multimeric complexes7ckq_CDFGI
reference complex7ckq_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRY

Estimated binding specificities ?

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# IC=3.142 IC/col=0.786 n_of_columns=4 specificity:   
A |  13   0  13   0
C |  54  96  57   0
G |  16   0  13   0
T |  13   0  13  96
scan!

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updated Thu Sep 12 14:38:32 2024