3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

home
updated Fri Dec 13 09:05:03 2024

structure name	CRYSTAL STRUCTURE OF CHYMOTRYPTIC FRAGMENT OF E. COLI SSB BOUND TO TWO 35-MER SINGLE STRAND DNAS
reference	Raghunathan et al. Nat.Struct.Biol. 7 648 2000
source	Escherichia coli
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	Nucleic acid-binding proteins;
reference complex	1eyg_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1eyg_A interface= asrgvnkvilvgnlgqdpevrympnggavanitlatseswrdkatgemkeqtewhrvvlfgklaevaseylrkgsqvyiegqlrtrkwtdqsgqdryttevvvnvggtmqml > 1eyg_B interface= asrgvnkvilvgnlgqdpevrympnggavanitlatsesweqtewhrvvlfgklaevaseylrkgsqvyiegqlrtrkwtdqsgqdryttevvvnvggtmqmlg > 1eyg_D interface= asrgvnkvilvgnlgqdpevrympnggavanitlatseswrdkamkeqtewhrvvlfgklaevaseylrkgsqvyiegqlrtrkwtdqsgqdryttevvvnvggtmqmlggr