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structure nameSTRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA
(ETHANOL REGULON TRANSCRIPTIONAL FACTOR)
sourceEMERICELLA NIDULANS
experimentNMR
structural superfamilyZn2/Cys6 DNA-binding domain;
sequence familyFungal Zn2Cys6 binuclear cluster domain;
redundant complexes1f5e
reference complex1f5e_P
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureMRRRKRRRW

Estimated binding specificities ?

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# IC=9.594 IC/col=1.066 n_of_columns=9 specificity:   
A |   7   0   7   0   0   0  96   0  14
C |   4   0   7  96   0   0   0   0  56
G |  81   0  74   0  96  96   0   0  13
T |   4  96   8   0   0   0   0  96  13
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Related DNA sequences reported in the literature ?


sitesourcematches (E-value)
term: ALCR
CCGCAPubMed1f4s_P(3.98e-06), 1f5e_P(1.62e-06)
CCGCNPubMed1f4s_P(3.10e-03), 1f5e_P(1.77e-03)
TGCGGPubMed1f4s_P(3.98e-06), 1f5e_P(1.62e-06)

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updated Sat Aug 2 00:51:38 2025