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structure nameSTRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA
(ETHANOL REGULON TRANSCRIPTIONAL FACTOR)
sourceEMERICELLA NIDULANS
experimentNMR
structural superfamilyZn2/Cys6 DNA-binding domain;
sequence familyFungal Zn2Cys6 binuclear cluster domain;
redundant complexes1f4s_P
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRRKRRRW

Estimated binding specificities ?

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# IC=8.431 IC/col=1.054 n_of_columns=8 specificity:   
A |  96   0   0   0   0  16  96  13
C |   0   0  96  96   0  54   0  54
G |   0   0   0   0  96  13   0  13
T |   0  96   0   0   0  13   0  16
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Related DNA sequences reported in the literature ?


sitesourcematches (E-value)
term: ALCR
TGCGGPubMed1f5e_P(1.62e-06), 1f4s_P(3.69e-06)
CCGCAPubMed1f5e_P(1.62e-06), 1f4s_P(3.69e-06)
CCGCNPubMed1f5e_P(1.77e-03), 1f4s_P(2.96e-03)
GCGGGGCPubMed1f4s_P(7.73e-03)

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updated Sun Aug 3 05:31:57 2025