1g9y_AB : 3D-footprint complex

structure name	HOMING ENDONUCLEASE I-CREI / DNA SUBSTRATE COMPLEX WITH CALCIUM
reference	Stoddard et al. Nat.Struct.Biol. 8 312 2001
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.05, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1g9y_A interface=21,23,25,27,29,31,32,37,43,45,65,67,69,72,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 1g9y_B interface=21,23,25,27,29,31,32,37,39,43,45,65,67,69,71,72,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgSVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQKNSYQQTYRRVKT/SIQKNSYQSQTYRRSVKT

Estimated binding specificities ?

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# IC=23.557 IC/col=1.071 n_of_columns=22

specificity:

A |   0  96  96  96   0   3   0   0   0  11  13  24   6   0  96   0   0  72   9   0   0   0
C |   0   0   0   0  96   6   0   0  96   6  56  24  79   0   0  96   0   0  16   0   0   0
G |  96   0   0   0   0   0  96   0   0  13  11  24   6  96   0   0  96   1   5   0   0  96
T |   0   0   0   0   0  87   0  96   0  66  16  24   5   0   0   0   0  23  66  96  96   0

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updated Fri Dec 13 09:12:34 2024