1glu_AB : 3D-footprint complex

structure name	CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA
reference	Otwinowski et al. Nature 352 497 1991
source	Rattus norvegicus
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1glu_A interface=28,29,33,78, mkparpclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearKtkk > 1glu_B interface=28,33, mkparpclvcsdeasgchygvltcgscKvffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkk
interface signature	KVRK/KR

Estimated binding specificities ?

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# IC=5.080 IC/col=0.339 n_of_columns=15

specificity:

A |   7  24  24  24  24  24  24  24  24   0   0   7  24   8   9
C |   7  24  24  24  24  24  24  24  24   0   0   7  24  81   7
G |  75  24  24  24  24  24  24  24  24   0  96   9  24   0  14
T |   7  24  24  24  24  24  24  24  24  96   0  73  24   7  66

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updated Mon Sep 9 12:20:48 2024