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structure nameGR DNA-BINDING DOMAIN:SGK 16BP COMPLEX-44
(Glucocorticoid receptor)
referenceYamamoto et al. Science 324 407 2009
sourceRattus norvegicus
experimentX-ray (resolution=1.61, R-factor=0.188)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyZinc finger, C4 type two domains;
multimeric complexes1glu_AB 1r4o_AB 1r4r_AB 3fyl_AB 3g6p_AB 3g6q_AB 3g6r_AB 3g6t_AB 3g6u_AB 3g8u_AB 3g8x_AB 3g97_AB 3g99_AB 3g9i_AB 3g9j_AB 3g9m_AB 3g9o_AB 3g9p_AB 4hn5_AB 4hn6_AB 5cbx_AB 5cbx_EF 5cby_AB 5cc1_AB 5cc1_WX 5e69_AB 5e6a_AB 5e6b_AB 5e6c_AB 5emc_AB 5emp_AB 5emq_AB 5va0_AB 5va7_AB 6bse_AB 6x6d_AB 6x6e_AB
redundant complexes1glu_A 1r4o_B 1r4r_B 3fyl_B 3g6p_A 3g6q_A 3g6r_A 3g6t_B 3g6u_B 3g8u_A 3g8x_A 3g97_A 3g99_B 3g9i_A 3g9j_A 3g9o_B 3g9p_B 4hn5_A 4hn6_B 5cbx_B 5cby_A 5cc1_A 5e69_B 5e6a_B 5e6b_A 5e6c_B 5e6d_B 5emc_B 5emp_B 5emq_B 5va0_B 5va7_B 6bqu_A 6bse_A 6bsf_A 6x6d_B 6x6e_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----KGVT--RG--RC   L   +-----------------------------2c7a_B    
                         ! 
  CAECKG--KGRG----   L   !                         +---1cit_A    
                       --5           +-------------2 
  --EAKG--KTRG----   L   !   +-------3             +---4umm_A    
                         !   !       ! 
  --ECKGAG--RG----   L   +---4       +-----------------4ond_A    
                             ! 
  --ECKGAGKGRG----   L       !                        +1hcq_E    
                             +------------------------1 
  --ECKGAG--KTRG--   L                                +4aa6_B    
                       

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updated Sat Jan 10 05:52:03 2026