1gt0_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A POU/HMG/DNA TERNARY COMPLEX
reference	Wilmanns et al. 'Genes 17 2048 2003
source	HOMO SAPIENS / MUS MUSCULUS
experiment	X-ray (resolution=2.60, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1gt0_C interface=41,42,43,46,47,84,126,129,130,133, psdleeleqfaktfkqrriklgftqgdvglamgklygndfSQTtiSRfealnlsfknmsklkpllekwlndaenlglsrrrkkRtsietnirvaleksflenqkptseeitmiadqlnmekevirVwfSNrrQkekr > 1gt0_D interface=5,8,10,11,18,30,31,34,72,76, drvkRpmNaFMvwsrgqRrkmaqenpkmhNSeiSkrlgaewkllsetekrpfideakrlralhmkehpdykYrprRktk
interface signature	SQTSRRVSNQ/RNFMRNSSYR

Estimated binding specificities ?

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# IC=18.213 IC/col=1.012 n_of_columns=18

specificity:

A |   0   0   0   0  13   0  24  24  13   9  96   0   0   0   0  78  96   6
C |  96   0   0   0   0   0  24  24   6   6   0   0   0  96   6   6   0   0
G |   0   0   0   0  82   0  24  24  68  75   0   0  96   0   0   6   0   0
T |   0  96  96  96   1  96  24  24   9   6   0  96   0   0  90   6   0  90

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updated Fri Dec 13 09:13:42 2024