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structure nameTERNARY COMPLEX OF THE DNA BINDING DOMAINS OF THE OCT1 AND SOX2 TRANSCRIPTION FACTORS WITH A 19MER OLIGONUCLEOTIDE FROM THE HOXB1 REGULATORY ELEMENT
(TRANSCRIPTION FACTOR SOX-2)
sourceHOMO SAPIENS
experimentNMR
structural superfamilyHMG-box;
sequence familyHMG high mobility group box;
multimeric complexes1gt0_CD 1o4x_AB 6ht5_DE 6t7b_ABCDEFGHK 8bx1_AE 8bx2_AE
redundant complexes6ht5_D 1gt0 6t7b 8bx1 8bx2
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNFMRNSSY

Estimated binding specificities ?

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# IC=5.564 IC/col=0.927 n_of_columns=6 specificity:   
A |   0   0   0   0  24  12
C |  96   0   0   0  12  48
G |   0   0   0   0  36  12
T |   0  96  96  96  24  24
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updated Fri Sep 13 15:53:59 2024