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structure nameTERNARY COMPLEX OF THE DNA BINDING DOMAINS OF THE OCT1 AND SOX2 TRANSCRIPTION FACTORS WITH A 19MER OLIGONUCLEOTIDE FROM THE HOXB1 REGULATORY ELEMENT
(TRANSCRIPTION FACTOR SOX-2)
sourceHOMO SAPIENS
experimentNMR
structural superfamilyHMG-box;
sequence familyHMG high mobility group box;
multimeric complexes1gt0_CD 1o4x_AB 6ht5_DE 6t7b_ABCDEFGHK 8bx1_AE 8bx2_AE
redundant complexes6ht5_D 1gt0 6t7b 8bx1 8bx2
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNFMRNSSY

Estimated binding specificities ?

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# IC=5.305 IC/col=0.884 n_of_columns=6 specificity:   
A |  17  17  96  96  96  10
C |   8  61   0   0   0   8
G |  52  10   0   0   0  78
T |  19   8   0   0   0   0
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updated Sat Jan 10 04:51:34 2026