1gtw_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER
reference	Tahirov et al.
source	HOMO SAPIENS
experiment	X-ray (resolution=1.85, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1gtw_A interface=11,14,17,18,21,22, dkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk > 1gtw_B interface=11,14,15,17,18,21,22, dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql
interface signature	RNAVSR/RNNAVSR

Estimated binding specificities ?

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# IC=9.667 IC/col=1.074 n_of_columns=9

specificity:

A |   0   0  24   0   0   0   0  96  12
C |   0   0  12  96   0  96  96   0  48
G |   0   0  48   0  96   0   0   0  24
T |  96  96  12   0   0   0   0   0  12

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updated Fri Dec 13 09:13:55 2024