1gtw_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER
reference	Tahirov et al.
source	HOMO SAPIENS
experiment	X-ray (resolution=1.85, R-factor=?)
structural superfamily	Leucine zipper domain;
reference complex	6mg1_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1gtw_A interface=11,14,17,18,21,22, dkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk > 1gtw_B interface=11,14,15,17,18,21,22, dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql
interface signature	RNAVSR/RNNAVSR

Estimated binding specificities ?

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# IC=9.649 IC/col=1.072 n_of_columns=9

specificity:

A |   0   0  13   0   0   0   0  96  13
C |   0   0  13  96   0  96  96   0  41
G |   0   0  54   0  96   0   0   0  27
T |  96  96  16   0   0   0   0   0  15

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updated Tue Jul 29 14:49:28 2025