| structure name | C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE-C2 CRYSTAL FORM (CCAATenhancer-binding protein beta) |
| reference | Horton et al. 'Nucleic 47 1774 2019 |
| source | Homo sapiens |
| experiment | X-ray (resolution=1.75, R-factor=0.216) |
| structural superfamily | Leucine zipper domain; |
| sequence family | Basic region leucine zipper; bZIP transcription factor; |
| multimeric complexes | 1gtw_AB 1gu4_AB 1gu5_AB 1h88_ABC 1h89_ABC 1h8a_ABC 1hjb_ABC 1hjb_DEF 1io4_ABC 2e42_AB 2e43_AB 6mg1_AB 6mg2_AB 6mg3_AB 7l4v_AB 7upz_AB |
| redundant complexes | 1gtw_A
1gu4_A
1gu5_A
1h89_A
1h8a_B
1hjb_D
1io4_A
2e42_B
2e43_B
6mg2_B
6mg3_A
 7l4v_A
7upz_A
1h88
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format------RA----NT----AAVT----STRG L +------------------------1hjb_A ! RG--QGNART--AGQT----FTRG------ L ! +1gd2_G ! +------2 --RA----NA----AAVT----STRG---- L --6 ! +1h89_A ! +----------4 --------NCRT--ATAT----STRG---- L ! ! ! +1t2k_D ! ! +-------1 RC----NC----AAAT----CTRC------ L +-----5 +2wt7_A ! ----RG------NT----ATAT------RG L ! +-----5vpe_C +------------3 ------------NC----AAAT------RT L +-----1a02_F |
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updated Tue Dec 19 13:45:25 2023