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structure nameC-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE-C2 CRYSTAL FORM
(CCAATenhancer-binding protein beta)
referenceHorton et al. 'Nucleic 47 1774 2019
sourceHomo sapiens
experimentX-ray (resolution=1.75, R-factor=0.216)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper; bZIP transcription factor;
multimeric complexes1gtw_AB 1gu4_AB 1gu5_AB 1h88_ABC 1h89_ABC 1h8a_ABC 1hjb_ABC 1hjb_DEF 1io4_ABC 2e42_AB 2e43_AB 6mg1_AB 6mg2_AB 6mg3_AB 7l4v_AB 7upz_AB 8k8d_AB
redundant complexes1gtw_A 1gu4_A 1gu5_A 1h89_A 1h8a_B 1hjb_D 1io4_A 2e42_B 2e43_B 6mg2_B 6mg3_A 7l4v_A 7upz_A 8k8d_B 1h88
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ------RA----NT----AAVT----STRG   L   +------------------------1hjb_A    
                                       ! 
  RG--QGNART--AGQT----FTRG------   L   !                       +1gd2_G    
                                       !                +------2 
  --RA----NA----AAVT----STRG----   L --6                !      +1h89_A    
                                       !     +----------4 
  --------NCRT--ATAT----STRG----   L   !     !          !       +1t2k_D    
                                       !     !          +-------1 
  RC----NC----AAAT----CTRC------   L   +-----5                  +2wt7_A    
                                             ! 
  ----RG------NT----ATAT------RG   L         !            +-----5vpe_C    
                                             +------------3 
  ------------NC----AAAT------RT   L                      +-----1a02_F    
                                     

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updated Fri Sep 13 22:37:29 2024