structure name | C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE-C2 CRYSTAL FORM (CCAATenhancer-binding protein beta) |
reference | Horton et al. 'Nucleic 47 1774 2019 |
source | Homo sapiens |
experiment | X-ray (resolution=1.75, R-factor=0.216) |
structural superfamily | Leucine zipper domain; |
sequence family | Basic region leucine zipper; bZIP transcription factor; |
multimeric complexes | 1gtw_AB 1gu4_AB 1gu5_AB 1h88_ABC 1h89_ABC 1h8a_ABC 1hjb_ABC 1hjb_DEF 1io4_ABC 2e42_AB 2e43_AB 6mg1_AB 6mg2_AB 6mg3_AB 7l4v_AB 7upz_AB 8k8d_AB |
redundant complexes | 1gtw_A 1gu4_A 1gu5_A 1h89_A 1h8a_B 1hjb_D 1io4_A 2e42_B 2e43_B 6mg2_B 6mg3_A 7l4v_A 7upz_A 8k8d_B 1h88 |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format------RA----NT----AAVT----STRG L +------------------------1hjb_A ! RG--QGNART--AGQT----FTRG------ L ! +1gd2_G ! +------2 --RA----NA----AAVT----STRG---- L --6 ! +1h89_A ! +----------4 --------NCRT--ATAT----STRG---- L ! ! ! +1t2k_D ! ! +-------1 RC----NC----AAAT----CTRC------ L +-----5 +2wt7_A ! ----RG------NT----ATAT------RG L ! +-----5vpe_C +------------3 ------------NC----AAAT------RT L +-----1a02_F |
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updated Fri Sep 13 22:37:29 2024