1gu4_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A HIGH AFFINITY DNA FRAGMENT
reference	Tahirov et al.
source	HOMO SAPIENS
experiment	X-ray (resolution=1.80, R-factor=?)
structural superfamily	Leucine zipper domain;
reference complex	6mg1_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1gu4_A interface=11,14,17,18,21,22, dkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk > 1gu4_B interface=11,14,15,17,18,21,22, dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql
interface signature	RNAVSR/RNNAVSR

Estimated binding specificities ?

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# IC=6.020 IC/col=0.669 n_of_columns=9

specificity:

A |  38   5   3   0   5   4   5  83  68
C |  13   6   8   0  70   5  38   0   9
G |  31   8   0  95   6  82   4  10   9
T |  14  77  85   1  15   5  49   3  10

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updated Mon Sep 9 12:21:23 2024