1gu5_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE MIM-1 PROMOTER
reference	Tahirov et al.
source	HOMO SAPIENS
experiment	X-ray (resolution=2.10, R-factor=?)
structural superfamily	Leucine zipper domain;
reference complex	6mg1_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1gu5_A interface=11,14,15,17,18,21,22, dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk > 1gu5_B interface=11,14,15,17,18,21,22, dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql
interface signature	RNNAVSR/RNNAVSR

Estimated binding specificities ?

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# IC=8.143 IC/col=0.905 n_of_columns=9

specificity:

A |  21   0   0  10  24  10   0  96  96
C |  10   0   0   1  24  55  96   0   0
G |  55   0   0  85  24  10   0   0   0
T |  10  96  96   0  24  21   0   0   0

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updated Mon Sep 9 12:21:34 2024