1gu5_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE MIM-1 PROMOTER
reference	Tahirov et al.
source	HOMO SAPIENS
experiment	X-ray (resolution=2.10, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1gu5_A interface=11,14,15,17,18,21,22, dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk > 1gu5_B interface=11,14,15,17,18,21,22, dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql
interface signature	RNNAVSR/RNNAVSR

Estimated binding specificities ?

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# IC=7.140 IC/col=0.793 n_of_columns=9

specificity:

A |   0   0   0  24  24  13  96  96  13
C |   0   0   0  24  24  57   0   0  54
G |   0   0  96  24  24  13   0   0  13
T |  96  96   0  24  24  13   0   0  16

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updated Fri Dec 13 09:14:13 2024