1gu5_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE MIM-1 PROMOTER
reference	Tahirov et al.
source	HOMO SAPIENS
experiment	X-ray (resolution=2.10, R-factor=?)
structural superfamily	Leucine zipper domain;
reference complex	6mg1_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1gu5_A interface=11,14,15,17,18,21,22, dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk > 1gu5_B interface=11,14,15,17,18,21,22, dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql
interface signature	RNNAVSR/RNNAVSR

Estimated binding specificities ?

readout + contact

# IC=7.099 IC/col=0.789 n_of_columns=9

specificity:

A |  16   0   0  16  24  24   0  96  96
C |  13   0   0  13  24  24  96   0   0
G |  54   0   0  54  24  24   0   0   0
T |  13  96  96  13  24  24   0   0   0

scan!

home
updated Tue Jul 29 14:49:45 2025