1h6f_AB : 3D-footprint complex

structure name	HUMAN TBX3, A TRANSCRIPTION FACTOR RESPONSIBLE FOR ULNAR-MAMMARY SYNDROME, BOUND TO A PALINDROMIC DNA SITE
reference	Muller et al.
source	HOMO SAPIENS
experiment	X-ray (resolution=1.70, R-factor=?)
structural superfamily	p53-like transcription factors;
reference complex	1h6f_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1h6f_A interface=29,161,162,178,182, dpkvhleakelwdqfhkrgtemvitksgRrmfppfkvrcsgldkkakyillmdiiaaddcrykfhnsrwmvagkadpempkrmyihpdspatgeqwmskvvtfhklkltnnisdkhgftilnsmhkyqprfhivrandilklpystfrtylfpetefiavTAyqndkitqlkidnnpFakgFrd > 1h6f_B interface=31,163,164,180,184, kddpkvhleakelwdqfhkrgtemvitksgRrmfppfkvrcsgldkkakyillmdiiaaddcrykfhnsrwmvagkadpempkrmyihpdspatgeqwmskvvtfhklkltnnisdkhgftilnsmhkyqprfhivrandilklpystfrtylfpetefiavTAyqndkitqlkidnnpFakgFrd
interface signature	RTAFF/RTAFF

Estimated binding specificities ?

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# IC=11.909 IC/col=0.662 n_of_columns=18

specificity:

A |   0  24  24  24   0  96   5   1   5  61   7   1   0   0  24  24  24  96
C |   0  24  24  24  96   0  63  92  23  19   9   1   0   0  24  24  24   0
G |   0  24  24  24   0   0  21   1   5   9  57  94   0  96  24  24  24   0
T |  96  24  24  24   0   0   7   2  63   7  23   0  96   0  24  24  24   0

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updated Mon Sep 9 12:22:50 2024