1h6f_AB : 3D-footprint complex

structure name	HUMAN TBX3, A TRANSCRIPTION FACTOR RESPONSIBLE FOR ULNAR-MAMMARY SYNDROME, BOUND TO A PALINDROMIC DNA SITE
reference	Muller et al.
source	HOMO SAPIENS
experiment	X-ray (resolution=1.70, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1h6f_A interface=29,161,162,178,182, dpkvhleakelwdqfhkrgtemvitksgRrmfppfkvrcsgldkkakyillmdiiaaddcrykfhnsrwmvagkadpempkrmyihpdspatgeqwmskvvtfhklkltnnisdkhgftilnsmhkyqprfhivrandilklpystfrtylfpetefiavTAyqndkitqlkidnnpFakgFrd > 1h6f_B interface=31,163,164,180,184, kddpkvhleakelwdqfhkrgtemvitksgRrmfppfkvrcsgldkkakyillmdiiaaddcrykfhnsrwmvagkadpempkrmyihpdspatgeqwmskvvtfhklkltnnisdkhgftilnsmhkyqprfhivrandilklpystfrtylfpetefiavTAyqndkitqlkidnnpFakgFrd
interface signature	RTAFF/RTAFF

Estimated binding specificities ?

readout + contact

# IC=10.861 IC/col=0.603 n_of_columns=18

specificity:

A |   3  24  24  24   0  96   2  10  12  65   2   8   2   0  24  24  24  89
C |   2  24  24  24  96   0  87  67  10  12   3  10   3   0  24  24  24   2
G |   2  24  24  24   0   0   2  11   7   8  91  68   2  96  24  24  24   2
T |  89  24  24  24   0   0   5   8  67  11   0  10  89   0  24  24  24   3

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updated Fri Dec 13 09:15:31 2024