interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX1
referenceTahirov et al.
sourceHOMO SAPIENS / MUS MUSCULUS
experimentX-ray (resolution=2.80, R-factor=?)
structural superfamilyLeucine zipper domain;
reference complex6mg1_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNAVSR/RNNAVSR/KREDNKNNS

Estimated binding specificities ?

readout + contactlogo
# IC=17.411 IC/col=0.871 n_of_columns=20 specificity:   
A |   5   0   6   0   0   0  80  24  24  24  24   0   0   5   0   0   0   0  96  10
C |   5  90  60   0   0   0   5  24  24  24  24   0   0   6  96   0  96  96   0  70
G |   0   5  10  96   0   0   5  24  24  24  24   0   0  65   0  96   0   0   0   6
T |  86   1  20   0  96  96   6  24  24  24  24  96  96  20   0   0   0   0   0  10
scan!

home
updated Mon Sep 9 12:23:10 2024