1h89_ABC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX2
reference	Tahirov et al.
source	HOMO SAPIENS / MUS MUSCULUS
experiment	X-ray (resolution=2.45, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1h89_A interface=6,9,12,13,16,17, eykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe > 1h89_B interface=6,9,10,12,13,16,17, eykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe > 1h89_C interface=52,55,56,103,106,107,110,111, qcqhrwqkvlnpelikgpwtkeedqrviklvqkygpkrwsviakhlkgrigKqcRErwhnhlnpevkktswteeedriiyqahkrlgnrwaeiakllpgrtdNaiKNhwNStmrr
interface signature	RNAVSR/RNNAVSR/KRENKNNS

Estimated binding specificities ?

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# IC=17.364 IC/col=0.914 n_of_columns=19

specificity:

A |  12   0   2   0   0   0  64  24  24  24  24   0   0   0   0   0   0   0  96
C |  10  96  74   0   0   0  12  24  24  24  24   0   0   0  96   0  96  96   0
G |  10   0  10  96   0   0  10  24  24  24  24   0   0  96   0  96   0   0   0
T |  64   0  10   0  96  96  10  24  24  24  24  96  96   0   0   0   0   0   0

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updated Fri Dec 13 09:16:05 2024