1h9t_AB : 3D-footprint complex

structure name	FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATOR
reference	Van Aalten et al.
source	ESCHERICHIA COLI
experiment	X-ray (resolution=3.25, R-factor=?)
structural superfamily	Fatty acid responsive transcription factor FadR, C-terminal domain;"Winged helix" DNA-binding domain;
reference complex	1h9t_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1h9t_A interface=31,40,41,42,45,46,61, aqspagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqknllaiqgr > 1h9t_B interface=31,40,41,42,45,46,61, aqspagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqknl
interface signature	RTRTREH/RTRTREH

Estimated binding specificities ?

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# IC=9.508 IC/col=0.864 n_of_columns=11

specificity:

A |   0   0   0   5  16   0  24  64   0   0  58
C |   0   0   0   5  58   0  24  10  96  96  16
G |   5  96  96   5  12  96  24  10   0   0  10
T |  91   0   0  81  10   0  24  12   0   0  12

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updated Tue Jul 29 14:52:07 2025